tiledb - Modern Database Engine for Complex Data Based on Multi-Dimensional Arrays

The modern database 'TileDB' introduces a powerful on-disk format for storing and accessing any complex data based on multi-dimensional arrays. It supports dense and sparse arrays, dataframes and key-values stores, cloud storage ('S3', 'GCS', 'Azure'), chunked arrays, multiple compression, encryption and checksum filters, uses a fully multi-threaded implementation, supports parallel I/O, data versioning ('time travel'), metadata and groups. It is implemented as an embeddable cross-platform C++ library with APIs from several languages, and integrations. This package provides the R support.

Last updated 5 days ago

arrayhdfss3storage-managertiledbcpp

11.59 score 103 stars 3 dependents 322 scripts 1.0k downloads

tiledbsoma - 'TileDB' Stack of Matrices, Annotated ('SOMA')

Interface for working with 'TileDB'-based Stack of Matrices, Annotated ('SOMA'): an open data model for representing annotated matrices, like those commonly used for single cell data analysis. It is documented at <https://github.com/single-cell-data>; a formal specification available is at <https://github.com/single-cell-data/SOMA/blob/main/abstract_specification.md>.

Last updated 1 days ago

cpp

9.47 score 95 stars 1 dependents 33 scripts

cellxgene.census - CZ CELLxGENE Discover Cell Census

API to facilitate the use of the CZ CELLxGENE Discover Census. For more information about the API and the project visit https://github.com/chanzuckerberg/cellxgene-census/

Last updated 3 months ago

6.70 score 89 stars 15 scripts